Output covariance matrices of coregionalization kernels
Source:R/kernel-coregionalization.R
coregionalization_matrix.RdReturns \(B = W W^\top + \operatorname{diag}(\kappa)\) for every coregionalization kernel in a kernel, such as the fitted kernel of a multi-output model.
Value
A named list with one \(P \times P\) matrix per
coregionalization kernel, named by its parameter path ("" for a
coregionalization kernel itself).
Details
\(B\) is identified, while \(W\) is not: \(W Q\) gives the same
\(B\) for any orthogonal \(Q\). In an ICM term \(B \otimes k\), the
scale of \(B\) also trades off with the variance of the input kernel
\(k\); the correlations stats::cov2cor(B) do not.
Stability
Experimental: this interface may change in a minor release, and every change is listed in NEWS. See gaussianprocesses-package for the policy.
Examples
kernel <- sum_kernel(
product_kernel(
select_dimensions(rbf_kernel(), 1),
select_dimensions(coregionalization_kernel(2, W = c(1, 1)), 2)
),
select_dimensions(coregionalization_kernel(2, kappa = c(0.5, 2)), 2)
)
coregionalization_matrix(kernel)
#> $kernel1.kernel2
#> [,1] [,2]
#> [1,] 2 1
#> [2,] 1 2
#>
#> $kernel2
#> [,1] [,2]
#> [1,] 0.5 0
#> [2,] 0.0 2
#>